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Production of a reference transcriptome and transcriptomic database (EdwardsiellaBase) for the lined sea anemone, Edwardsiella lineata, a parasitic cnidarian
BMC GenomicsStefanik DJ, Lubinski TJ, Granger BR, Byrd AL, Reitzel AM, DeFilippo L, Lorenc A, Finnerty JR -
Toxigenic Clostridium perfringens isolated from at-risk pediatric inflammatory bowel disease patients
J Crohns ColitisKuo J, Uzunovic J, Jacobson A, Dourado M, Gierke S, Rajendram M, Keilberg D, Mar J, Stekol M, Curry J, Verstraete S, Lund J, Liang Y, Tamburini FB, Omattage NS, Masureel M, Rutherford ST, Hackos DH, Tan MW, Byrd AL, Keir ME, Skippington E, Storek KM -
Melanoma and microbiota: Current understanding and future directions
Cancer CellRouty B, Jackson T, Mahlmann L, Baumgartner CK, Blaser M, Byrd AL, Corvaia N, Couts K, Davar D, Derosa L, Hang HC, Hospers G, Isaksen M, Kroemer G, Malard F, McCoy KD, Meisel M, Pal S, Ronai Z, Segal E, Sepich-Poore GD, Shaikh F, Sweis RF, Trinchieri G, van den Brink M, Weersma RK, Whiteson K, Zhao L, McQuade J, Zarour H, Zitvogel L -
Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
Cell Rep MedYounginger BS, Mayba O, Reeder J, Nagarkar DR, Modrusan Z, Albert ML, Byrd AL -
Biomarker technologies to support early clinical immuno-oncology development: Advances and interpretation
Clin Cancer ResCannarile MA, Gomes B, Canamero M, Reis B, Byrd AL, Charo J, Yadav M, Karanikas V -
Microbial genetic and transcriptional contributions to oxalate degradation by the gut microbiota in health and disease
ElifeLiu M, Devlin JC, Hu J, Volkova A, Battaglia TW, Ho M, Asplin JR, Byrd AL, Loke P, Li H, Ruggles KV, Tsirigos A, Blaser MJ, Nazzal L -
Microbial contributions to oxalate metabolism in health and disease
ElifeLiu M, Devlin JC, Hu J, Volkova A, Battaglia TW, Ho M, Asplin JR, Byrd AL, Loke P, Li H, Ruggles KV, Tsirigos A, Blaser MJ, Nazzal L -
Gut microbiome stability and dynamics in healthy donors and patients with non-gastrointestinal cancers.
J Exp MedByrd AL, Liu M, Fujimura KE, Lyalina S, Nagarkar DR, Charbit B, Bergstedt J, Patin E, Harrison OJ, Quintana-Murci L, Mellman I, Duffy D, Albert ML, Milieu Intérieur Consortium. -
A Cutibacterium acnes antibiotic modulates human skin microbiota composition in hair follicles
Sci Transl MedClaesen J, Spagnolo JB, Flores Ramos S, Kurita KL, Byrd AL, Aksenov AA, Melnik AV, Wong WR, Wang S, Hernandez RD, Donia MS, Dorrestein PC, Kong HH, Segre JA, Linington RG, Fischbach MA, Lemon KP -
Stability and dynamics of the human gut microbiome and its association with systemic immune traits
bioRxivByrd AL, Liu M, Fujimura KE, Lyalina S, Nagarkar DR, Charbit B, Bergstedt J, Patin E, Harrison OJ, Quintana-Murci L, Duffy D, Albert ML, Milieu Intérieur Consortium. -
A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals
MicrobiomeScepanovic P, Hodel F, Mondot S, Partula V, Byrd AL, Hammer C, Alanio C, Bergstedt J, Patin E, Touvier M, Lantz O, Albert ML, Duffy D, Quintana-Murci L, Fellay J, Milieu Intérieur Consortium. -
Commensal-specific T cell plasticity promotes rapid tissue adaptation to injury.
ScienceHarrison OJ, Linehan JL, Shih HY, Bouladoux N, Han SJ, Smelkinson M, Sen SK, Byrd AL, Enamorado M, Yao C, Tamoutounour S, Van Laethem F, Hurabielle C, Collins N, Paun A, Salcedo R, O'Shea JJ, Belkaid Y -
Contextual control of skin immunity and inflammation by Corynebacterium
J Exp MedRidaura VK, Bouladoux N, Claesen J, Chen YE, Byrd AL, Constantinides MG, Merrill ED, Tamoutounour S, Fischbach MA, Belkaid Y -
The human skin microbiome
Nature Reviews MicrobiologyByrd AL, Belkaid Y, Segre JA -
Non-classical Immunity Controls Microbiota Impact on Skin Immunity and Tissue Repair.
CellLinehan JL, Harrison OJ, Han SJ, Byrd AL, Vujkovic-Cvijin I, Villarino AV, Sen SK, Shaik J, Smelkinson M, Tamoutounour S, Collins N, Bouladoux N, Dzutsev A, Rosshart SP, Arbuckle JH, Wang CR, Kristie TM, Rehermann B, Trinchieri G, Brenchley JM, O'Shea JJ, Belkaid Y
